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DataJoint Documentation

DataJoint is a Python framework for building scientific data pipelines with automated computation, integrity constraints, and seamless integration of relational databases with object storage.

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llms.txt
https://docs.datajoint.com/llms.txt
llms-full.txt
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Infrastructure · Data and analytics · Developer tools · Science and research
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# DataJoint Documentation

> DataJoint is a Python framework for building scientific data pipelines with automated computation, integrity constraints, and seamless integration of relational databases with object storage.

> For the complete documentation in a single file, see [/llms-full.txt](/llms-full.txt)

## Concepts

- [Data Pipelines](/explanation/data-pipelines/)
- [FAQ](/explanation/faq/)
- [Relational Workflow Model](/explanation/relational-workflow-model/)
- [Data Integrity](/explanation/data-integrity/)
- [Entity Integrity](/explanation/entity-integrity/)
- [Referential Integrity](/explanation/referential-integrity/)
- [Normalization](/explanation/normalization/)
- [Transactions](/explanation/transactions/)
- [Computation Model](/explanation/computation-model/)
- [Fan-Out Ingestion](/explanation/fan-out-ingestion/)
- [Schema as a Workflow Specification](/explanation/schema-as-workflow-specification/)
- [Comparison to Workflow Languages](/explanation/comparison-to-workflow-languages/)
- [Comparison to Provenance Systems](/explanation/comparison-to-provenance-systems/)
- [Query Algebra](/explanation/query-algebra/)
- [Semantic Matching](/explanation/semantic-matching/)
- [Type System](/explanation/type-system/)
- [Custom Codecs](/explanation/custom-codecs/)
- [Spark Adapters](/explanation/spark-adapters/)
- [PostgreSQL CDC and Replica Identity](/explanation/postgresql-cdc-replication/)

## Tutorials

- [First Pipeline](/tutorials/basics/01-first-pipeline/)
- [Schema Design](/tutorials/basics/02-schema-design/)
- [Data Entry](/tutorials/basics/03-data-entry/)
- [Queries](/tutorials/basics/04-queries/)
- [Computation](/tutorials/basics/05-computation/)
- [Object Storage](/tutorials/basics/06-object-storage/)
- [University Database](/tutorials/examples/university/)
- [Hotel Reservations](/tutorials/examples/hotel-reservations/)
- [Languages & Proficiency](/tutorials/examples/languages/)
- [Fractal Pipeline](/tutorials/examples/fractal-pipeline/)
- [Blob Detection](/tutorials/examples/blob-detection/)
- [Calcium Imaging](/tutorials/domain/calcium-imaging/calcium-imaging/)
- [Electrophysiology](/tutorials/domain/electrophysiology/electrophysiology/)
- [Ephys with Object Storage](/tutorials/domain/electrophysiology/ephys-with-npy/)
- [Allen CCF](/tutorials/domain/allen-ccf/allen-ccf/)
- [SQL Comparison](/tutorials/advanced/sql-comparison/)
- [JSON Data Type](/tutorials/advanced/json-type/)
- [Distributed Computing](/tutorials/advanced/distributed/)
- [Custom Codecs](/tutorials/advanced/custom-codecs/)
- [Instances](/tutorials/advanced/instances/)
- [Three-Part make()](/tutorials/advanced/three-part-make/)

## How-To

- [Installation](/how-to/installation/)
- [Manage Secrets](/how-to/manage-secrets/)
- [Configure Database](/how-to/configure-database/)
- [Use Isolated Instances](/how-to/use-instances/)
- [Configure Object Storage](/how-to/configure-storage/)
- [Command-Line Interface](/how-to/use-cli/)
…

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