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The Phage
Your hub for bacteriophage (phage) research and community: news, events, career opportunities, protocols, and expert insights.
Their llms.txt
The beginning of the file, from our validated copy saved 2026-10-23T18:13:00.195Z. Cached copy · Source on thephage.xyz
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# The Phage
Your hub for bacteriophage (phage) research and community: news, events, career opportunities, protocols, and expert insights.
## Sitemaps
- [XML Sitemap](https://www.thephage.xyz/sitemap.xml): Contains all public & indexable URLs for this website.
## Posts
- [One Learning Journey: Exploring Phage Bioinformatics with The Phage](https://www.thephage.xyz/2026/10/19/one-learning-journey-exploring-phage-bioinformatics-with-the-phage/) - What happens when curiosity about bacteriophages meets the world of bioinformatics? Our three-week training journey, was all about taking that first step. Every New Journey Starts Somewhere Bioinformatics can sound intimidating when you are just getting started. You might be comfortable with microbiology, understand bacteriophages, and be excited about phage research. But the moment someone
- [Phynteny: Using Gene Order to Decode Phage Genomes](https://www.thephage.xyz/2024/11/14/phynteny-phage-genome-annotation-machine-learning/) - Read about Phynteny a tool that utilizes the LSTM model, explain how it works and compare it to other popular tools like PHOLD and Pharokka
- [How a phage integrase controls the direction of DNA recombination](https://www.thephage.xyz/2026/10/16/phage-integrase-controls-dna-recombination/) - A new study reveals how structural changes in a bacteriophage integrase help control the direction of DNA recombination, regulating integration and excision.
- [Lysogenic to lytic cycle: Bacteriophage Induction](https://www.thephage.xyz/2023/08/18/bacteriophage-induction/) - Phage induction, a pivotal moment in the phage lifecycle, occurs when a temperate phage is activated from its lysogenic state to enter the lytic cycle.
- [Engineered Bacteria Produce Phages in the Gut to Fight Salmonella](https://www.thephage.xyz/2026/09/19/engineered-bacteria-produce-phages-in-the-gut-to-fight-salmonella/) - Researchers engineered E. coli to produce lytic phages inside the gut, reducing Salmonella Typhimurium infection and improving survival in mice
- [iPHoP: Host Prediction Tool for phages and archaeal viruses](https://www.thephage.xyz/2023/08/20/iphop-the-ultimate-host-prediction-tool-for-microbial-viruses/) - Integrated Phage Host Prediction, or iPHoP, is a command-line pipeline for automatically determining the host genus of new bacteriophages and archaeal viruses based on those organisms' genomic sequences. Imagine viruses as cunning toolkits, waiting for a chance to shine. But here's the catch: these viruses are like picky guests at a party; they demand a
- [Could phage-loaded hydrogel be the future of treating wound infections?](https://www.thephage.xyz/2026/09/26/could-phage-loaded-hydrogel-be-the-future-of-treating-wound-infections/) - Researchers at Stanford University developed HydroPhage, a hyaluronan-based hydrogel containing bacteriophages for local treatment of infected wounds
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